Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014011.1 Corchorus olitorius cultivar O-4 contig14044, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2060

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1222
154
7.9
154
88
2
1742
20
18
19
40
1.91
1--1222
461
2.6
459
90
2
1858
20
18
19
40
1.91
1--2057
615
3.3
611
78
11
2161
20
18
19
41
1.90
1170--1274
51
2.0
52
88
1
158
18
15
16
50
1.78
1222--2057
154
5.4
154
88
2
1151
20
17
18
43
1.88

Tables:   1

The End!