Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014029.1 Corchorus olitorius cultivar O-4 contig14062, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7553

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
835--936
51
2.0
50
81
9
118
22
22
13
41
1.89
1476--1556
41
2.0
42
92
2
137
33
4
22
39
1.75
4552--4584
12
2.7
12
95
4
57
57
9
0
33
1.30
4882--4964
30
3.0
27
84
10
121
42
3
3
50
1.37
5414--5495
9
8.6
9
73
20
60
41
2
2
53
1.27
5414--5487
12
6.7
11
73
20
50
41
2
2
52
1.29
5414--5494
30
2.7
30
80
16
105
41
2
2
53
1.27
4613--5729
531
2.1
527
93
3
1504
40
11
6
42
1.66

Tables:   1

The End!