Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014043.1 Corchorus olitorius cultivar O-4 contig14076, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7027

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
21
1.9
21
100
0
80
25
22
22
30
1.99
1848--1949
33
3.1
33
84
8
111
45
21
6
26
1.77
1881--1990
33
3.3
33
79
2
105
44
20
8
27
1.79
1896--2022
66
1.9
66
83
3
166
42
22
8
25
1.82
2608--2640
15
2.1
16
88
5
50
18
9
27
45
1.79
6309--6437
33
3.9
33
80
7
129
43
22
10
24
1.83

Tables:   1

The End!