Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014048.1 Corchorus olitorius cultivar O-4 contig14081, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8687

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
345--515
30
5.8
30
88
7
178
41
23
14
20
1.89
744--802
12
4.9
12
82
14
50
86
5
3
5
0.78
760--802
1
43.0
1
80
0
50
90
6
2
0
0.52
731--801
17
4.2
16
78
8
70
84
5
2
7
0.85
1022--1917
30
30.0
30
85
2
1113
45
19
13
20
1.84
2246--2757
35
14.4
36
84
5
589
41
19
21
18
1.91
2246--2757
71
7.2
69
89
3
630
41
19
21
18
1.91
4665--4691
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!