Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014050.1 Corchorus olitorius cultivar O-4 contig14083, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4342

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118--313
29
6.7
29
88
3
180
40
23
14
21
1.90
114--312
59
3.4
58
79
11
169
39
24
15
21
1.91
94--282
29
6.6
29
85
8
176
39
25
15
19
1.91
145--316
59
2.9
58
81
11
181
40
23
14
21
1.90
489--563
29
2.6
30
82
6
100
22
25
12
40
1.88
1100--1128
14
2.1
14
100
0
58
6
13
27
51
1.66
1749--1807
21
2.8
21
97
0
109
27
18
27
27
1.98
2644--2690
26
1.9
24
87
12
69
27
27
4
40
1.75

Tables:   1

The End!