Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014054.1 Corchorus olitorius cultivar O-4 contig14087, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45521

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1316--1387
31
2.4
31
83
6
85
43
29
12
15
1.83
2076--2109
11
3.1
11
84
16
52
82
5
11
0
0.83
8539--8732
101
2.0
97
91
4
316
32
23
7
36
1.82
10311--10361
25
2.0
25
92
0
84
9
9
21
58
1.58
10790--10829
19
2.0
20
85
4
55
20
10
15
55
1.68
15549--15611
31
2.1
30
82
11
76
4
6
12
76
1.14
26406--26477
16
4.5
16
77
10
67
54
29
9
6
1.59
26405--26477
32
2.3
32
80
4
85
53
28
10
6
1.61

Tables:   1

The End!