Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014063.1 Corchorus olitorius cultivar O-4 contig14096, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45186

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1191--1238
24
2.0
24
95
0
87
18
16
8
56
1.65
5429--5460
16
2.0
16
100
0
64
50
12
6
31
1.65
11119--11164
11
4.5
11
76
15
53
17
36
17
28
1.92
11392--11479
43
2.0
43
93
0
149
34
6
20
38
1.79
36604--36658
20
2.8
20
74
0
56
36
12
1
49
1.52
37212--37393
88
2.1
88
94
3
323
32
10
7
48
1.65
37212--37416
88
2.3
87
90
6
308
32
10
8
48
1.68
37481--37524
23
1.9
23
86
9
63
25
11
15
47
1.79
37468--37639
80
2.2
80
97
0
326
33
8
12
45
1.72
37548--37594
23
2.2
21
85
11
60
29
8
10
51
1.66
37555--37605
23
2.2
23
82
6
68
25
9
13
50
1.72
37990--38028
20
2.0
20
84
0
51
33
7
10
48
1.66
38155--38195
21
2.0
21
85
4
57
31
9
12
46
1.74
41278--41319
19
2.2
19
91
0
66
64
16
7
11
1.48
43539--43574
2
18.0
2
94
0
63
47
0
0
52
1.00
44321--44345
2
12.5
2
100
0
50
0
0
48
52
1.00

Tables:   1

The End!