Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014069.1 Corchorus olitorius cultivar O-4 contig14102, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60471

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2258--2306
23
2.1
23
88
0
71
32
8
14
44
1.74
3728--3764
16
2.2
17
86
13
51
64
0
13
21
1.27
5970--6014
23
2.0
23
86
0
63
26
22
15
35
1.94
16893--16971
33
2.6
30
81
14
99
39
25
13
21
1.90
33611--33646
12
2.8
13
91
8
65
36
13
25
25
1.93
44509--44561
26
2.1
25
86
6
72
37
5
16
39
1.73
46395--46428
18
1.9
17
88
5
50
38
29
8
23
1.85
51267--51337
31
2.3
31
73
4
72
28
4
8
59
1.46
52051--52084
12
2.9
12
91
4
52
32
11
17
38
1.86
52052--52110
29
2.0
31
86
6
86
35
10
18
35
1.85
53471--53510
15
2.6
16
92
4
64
12
10
12
65
1.49
57176--57222
21
2.2
21
88
0
67
17
46
23
12
1.82
58953--58979
8
3.4
8
100
0
54
33
0
25
40
1.56
59074--59107
12
2.9
12
91
4
52
32
11
17
38
1.86
59075--59133
29
2.0
31
86
6
86
35
10
18
35
1.85

Tables:   1

The End!