Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014076.1 Corchorus olitorius cultivar O-4 contig14109, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27357

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
588--616
15
1.9
15
100
0
58
55
0
27
17
1.42
1307--1390
29
2.8
31
76
7
93
33
11
22
32
1.91
2904--3109
105
2.0
102
90
6
326
34
13
2
50
1.54
2992--3051
23
2.4
26
72
10
63
40
11
1
46
1.50
3057--3100
23
1.9
23
81
9
54
25
13
0
61
1.32
8135--8322
95
1.9
99
90
5
303
32
16
18
32
1.93
10741--10770
15
2.0
15
93
0
51
0
16
0
83
0.65
12632--12747
20
5.6
19
76
16
115
47
30
5
17
1.69
12627--12758
42
3.1
42
98
0
255
45
30
4
19
1.70
16543--16942
199
2.0
201
93
0
687
30
13
14
41
1.84
17761--17851
45
2.0
45
89
0
137
20
27
3
48
1.65

Tables:   1

The End!