Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014077.1 Corchorus olitorius cultivar O-4 contig14110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19034

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
805--865
22
2.8
21
75
18
61
13
13
6
67
1.41
821--867
23
2.0
23
92
8
78
8
14
4
72
1.24
10801--10843
20
2.3
18
84
8
50
2
16
0
81
0.79
13475--13523
14
3.4
14
73
15
55
28
4
8
59
1.45
13467--13530
29
2.2
29
97
0
119
31
3
14
51
1.57
13586--13641
29
1.9
29
96
0
103
21
3
30
44
1.69
15730--15770
19
2.2
19
86
0
55
60
19
7
12
1.54
15933--16008
28
2.7
27
76
9
82
42
14
18
25
1.88
15988--16289
98
3.1
98
99
0
597
34
20
12
32
1.90
17097--17199
35
2.9
35
92
4
163
3
37
42
15
1.65
17807--17832
3
8.7
3
100
0
52
30
0
0
69
0.89

Tables:   1

The End!