Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014080.1 Corchorus olitorius cultivar O-4 contig14113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7475

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3602--3674
37
1.9
37
86
2
101
60
8
16
15
1.58
3602--3689
37
2.3
38
80
5
99
63
7
15
12
1.50
4505--5034
58
9.1
58
86
3
654
26
16
16
40
1.89
5292--5400
29
3.8
29
92
0
164
23
21
21
33
1.97
5293--5424
29
4.5
29
89
2
158
22
20
21
34
1.96
5473--5625
29
5.2
29
92
2
234
25
13
23
37
1.91
5483--5673
29
6.6
29
85
2
156
23
14
22
39
1.91
5469--5673
58
3.5
58
84
4
200
23
15
22
38
1.92

Tables:   1

The End!