Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014083.1 Corchorus olitorius cultivar O-4 contig14116, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30508

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4695--4744
21
2.4
21
93
6
84
26
26
20
28
1.99
5358--5420
5
12.6
5
82
12
60
84
15
0
0
0.63
5357--5420
16
3.8
17
76
17
71
84
15
0
0
0.63
5370--5422
4
13.2
4
88
11
58
81
18
0
0
0.70
5357--5420
22
2.9
22
88
9
87
84
15
0
0
0.63
17691--17735
21
2.1
21
83
4
54
64
0
0
35
0.94
18004--18037
17
2.0
17
94
0
59
67
0
0
32
0.91
20440--20465
2
13.0
2
100
0
52
50
0
0
50
1.00
20642--20669
6
4.7
6
100
0
56
17
0
53
28
1.44
21861--21904
6
7.3
6
100
0
88
50
34
0
15
1.45
21934--22081
38
3.9
38
91
1
226
22
35
18
23
1.96
21934--22081
77
1.9
75
89
2
224
22
35
18
23
1.96
29362--29402
21
2.0
21
95
0
73
19
17
26
36
1.94
29584--29713
65
2.0
65
93
0
224
21
26
30
22
1.99
30316--30368
26
2.0
25
85
10
70
26
26
3
43
1.72

Tables:   1

The End!