Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014087.1 Corchorus olitorius cultivar O-4 contig14120, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10591

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1007--1108
51
2.0
50
83
9
127
21
23
13
41
1.89
2919--2952
17
2.1
16
88
5
50
44
20
2
32
1.67
4483--4511
12
2.3
13
94
5
51
0
6
3
89
0.57
6856--6907
18
2.8
18
78
18
54
78
15
3
1
0.98
6865--6913
23
2.1
23
88
3
71
75
18
2
4
1.06
8774--8812
15
2.6
15
87
0
60
28
17
46
7
1.76
9829--9861
13
2.5
14
90
9
52
90
6
3
0
0.52
9833--9862
10
3.0
10
90
0
51
90
6
3
0
0.56

Tables:   1

The End!