Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014089.1 Corchorus olitorius cultivar O-4 contig14122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43955

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2273--2302
15
2.0
15
93
0
51
33
23
0
43
1.54
2564--2631
29
2.4
29
83
14
72
45
2
7
44
1.46
7349--7386
17
2.2
17
86
9
51
60
5
0
34
1.19
7432--7462
14
2.3
14
94
5
55
45
0
0
54
0.99
7430--7466
13
2.5
15
79
20
51
48
0
0
51
1.00
9172--9274
52
2.0
52
90
3
163
44
3
13
37
1.62
23504--23533
15
2.0
15
100
0
60
13
20
6
60
1.55
23826--23872
21
2.2
21
85
7
60
51
8
8
31
1.63

Tables:   1

The End!