Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014090.1 Corchorus olitorius cultivar O-4 contig14123, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24754

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4617--4662
22
2.1
22
100
0
92
52
8
8
30
1.62
17544--17575
2
16.0
2
100
0
64
50
0
0
50
1.00
20141--20184
22
2.0
22
86
8
63
40
13
4
40
1.65
20278--20766
22
22.4
22
72
12
143
36
16
9
37
1.81
20508--20591
23
3.7
23
93
3
143
39
15
5
39
1.72
20287--20765
66
7.3
66
69
13
213
36
15
9
37
1.81
20885--21214
22
14.8
22
66
15
124
35
15
9
39
1.80
21225--21284
22
2.7
22
80
10
68
35
16
10
38
1.82
21324--21379
21
2.5
21
77
8
58
37
17
5
39
1.73
21396--21436
22
2.0
22
90
9
68
31
17
9
41
1.82
22364--22399
18
2.0
18
100
0
72
61
0
33
5
1.19
22447--22582
36
3.8
36
87
1
182
13
37
38
10
1.78

Tables:   1

The End!