Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014093.1 Corchorus olitorius cultivar O-4 contig14126, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20165

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1918--1988
31
2.4
31
86
9
94
25
12
12
49
1.76
2021--2076
21
2.6
23
75
21
66
32
7
17
42
1.77
5166--5213
22
2.2
21
81
3
60
20
45
18
14
1.85
5140--5217
32
2.4
33
81
8
81
21
47
17
12
1.81
5172--5217
21
2.1
22
88
4
67
19
50
17
13
1.78
10118--10446
48
6.9
47
83
4
365
20
27
17
34
1.95
10118--10447
144
2.3
144
84
3
407
20
27
17
34
1.95
10264--10485
48
4.6
48
82
7
150
19
28
18
32
1.96
19473--19548
29
2.6
29
82
15
95
35
1
19
43
1.60

Tables:   1

The End!