Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014096.1 Corchorus olitorius cultivar O-4 contig14129, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6385

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
421--807
30
12.9
30
89
1
555
20
13
18
47
1.82
1657--1816
29
5.6
28
81
6
171
16
16
23
43
1.88
1658--1811
57
2.7
59
86
5
201
17
16
23
42
1.89
1655--1817
86
1.9
86
86
6
233
17
16
23
42
1.88
1658--1817
58
2.8
58
84
4
191
16
16
22
43
1.87
5248--5374
65
2.0
65
95
0
227
39
11
22
26
1.88

Tables:   1

The End!