Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014100.1 Corchorus olitorius cultivar O-4 contig14133, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27898

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1454--1485
16
1.9
17
93
6
57
81
0
9
9
0.88
11055--11106
21
2.4
22
83
3
61
25
26
30
17
1.97
12700--12747
12
4.2
11
82
10
60
8
4
2
85
0.80
13877--13925
21
2.3
21
82
6
55
40
16
28
14
1.87
17658--17690
16
2.1
16
88
5
50
63
12
6
18
1.48
20939--20978
15
2.6
16
88
4
55
62
12
10
15
1.54
25550--25688
51
2.7
51
89
2
217
10
37
38
13
1.80
25744--25818
10
7.0
10
72
13
51
76
1
21
1
0.94
25750--25790
17
2.4
17
87
4
55
82
0
17
0
0.66
25741--25784
14
3.4
13
84
9
54
84
2
13
0
0.73
25736--25812
21
3.4
23
73
12
61
79
2
16
1
0.92
25750--25810
31
2.0
31
83
6
79
77
0
21
1
0.86

Tables:   1

The End!