Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014109.1 Corchorus olitorius cultivar O-4 contig14142, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71799

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3951--3992
22
2.0
21
86
9
59
47
14
9
28
1.75
36353--36383
13
2.4
13
94
0
53
19
9
25
45
1.81
37131--37155
7
3.6
7
100
0
50
88
0
12
0
0.53
42179--42224
22
2.0
22
83
4
56
13
36
10
39
1.79
55795--55853
6
9.7
6
92
3
100
49
0
18
32
1.48
62395--62453
19
3.0
19
75
5
64
32
16
11
38
1.86
69852--70171
161
2.0
161
86
2
446
34
14
22
29
1.93
70603--71799
323
3.7
320
89
3
1787
36
18
13
32
1.89

Tables:   1

The End!