Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014111.1 Corchorus olitorius cultivar O-4 contig14144, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5588

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2610
334
7.8
334
88
2
3704
36
18
14
31
1.90
1--3463
667
5.3
664
88
2
4589
36
18
13
32
1.90
3532--3640
48
2.3
47
82
4
128
27
17
17
37
1.92
5277--5336
20
2.9
21
66
14
52
28
26
10
35
1.89
5247--5577
81
4.1
82
86
5
435
30
25
7
35
1.84
5440--5497
20
2.9
20
73
0
62
27
29
6
36
1.83
5247--5577
41
8.2
40
85
6
393
30
25
7
35
1.84

Tables:   1

The End!