Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014123.1 Corchorus olitorius cultivar O-4 contig14156, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60321

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
276--2481
332
6.6
329
80
7
2071
34
14
16
35
1.89
12683--12729
24
2.0
24
100
0
94
17
6
29
46
1.72
16950--17185
117
2.0
116
93
0
400
36
13
16
33
1.88
18142--18184
14
2.8
16
79
13
54
74
4
6
13
1.19
30591--30625
18
1.9
18
88
11
54
37
5
20
37
1.76
60291--60321
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!