Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014126.1 Corchorus olitorius cultivar O-4 contig14159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58475

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--1257
333
3.8
326
80
5
1329
32
14
15
37
1.88
14820--14979
80
2.0
80
93
0
275
23
32
11
31
1.91
19103--19132
14
2.1
14
93
0
51
0
13
10
76
1.01
26040--26119
40
2.0
40
95
4
146
50
5
2
42
1.37
33917--34018
50
2.0
50
98
0
195
28
15
10
45
1.80
42216--42631
203
2.0
203
88
3
615
37
17
16
28
1.91
58086--58182
48
2.0
48
100
0
194
22
16
24
36
1.94

Tables:   1

The End!