Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014128.1 Corchorus olitorius cultivar O-4 contig14161, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14203

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
171--1005
333
2.5
331
88
3
1218
37
14
14
34
1.86
4035--4156
42
2.8
44
71
14
108
40
18
13
26
1.88
8887--9024
69
2.0
69
98
0
267
35
14
19
30
1.92
9035--9109
38
2.0
38
97
0
141
29
9
12
49
1.71
9406--9494
44
2.1
42
87
4
124
47
13
16
22
1.82
9493--9558
32
2.1
32
97
0
123
27
12
43
16
1.83

Tables:   1

The End!