Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014133.1 Corchorus olitorius cultivar O-4 contig14166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37316

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2601--2631
2
16.0
2
93
6
55
51
0
0
48
1.00
2604--2629
13
2.0
13
100
0
52
53
0
0
46
1.00
2602--2631
15
2.0
15
100
0
60
53
0
0
46
1.00
2631--2659
2
14.5
2
100
0
58
51
0
48
0
1.00
6384--6411
3
9.3
3
100
0
56
0
0
32
67
0.91
17982--18043
26
2.5
25
82
17
76
38
6
9
45
1.63
18000--18051
26
2.0
26
85
7
70
48
5
9
36
1.60
19110--19165
21
2.8
19
83
5
67
32
23
8
35
1.86
19131--19167
19
1.9
19
94
0
65
29
18
13
37
1.90
26292--26347
24
2.4
24
88
8
80
41
12
8
37
1.74
34504--34535
17
1.9
16
93
6
55
37
0
9
53
1.34

Tables:   1

The End!