Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014135.1 Corchorus olitorius cultivar O-4 contig14168, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25225

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74--106
16
2.1
17
88
11
52
48
0
0
51
1.00
137--277
31
4.6
31
78
5
135
39
12
15
32
1.84
407--486
29
2.7
30
79
14
94
23
16
10
50
1.75
1297--1376
41
2.0
41
97
0
151
38
8
22
30
1.84
2070--2100
11
2.8
11
90
0
53
32
9
22
35
1.87
15071--15160
44
2.0
44
91
0
144
23
24
11
41
1.87
15710--15761
26
2.0
26
96
0
95
50
17
17
15
1.79
16441--16468
14
2.0
14
100
0
56
50
0
0
50
1.00
16439--16471
17
1.9
17
93
0
57
51
0
0
48
1.00
17636--17689
29
1.9
28
85
7
74
24
29
9
37
1.86
19774--19987
108
2.0
107
96
0
392
26
24
11
37
1.89
20016--20185
93
1.8
94
96
1
315
25
27
14
32
1.94
23140--23174
17
2.1
17
94
0
61
14
22
37
25
1.92

Tables:   1

The End!