Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014139.1 Corchorus olitorius cultivar O-4 contig14172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51986

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
578--619
15
2.7
15
85
3
57
16
4
11
66
1.40
17957--18109
80
1.9
79
86
5
220
35
9
13
42
1.75
22817--22841
13
1.9
13
100
0
50
32
4
32
32
1.76
24878--24907
11
2.7
11
94
0
51
40
3
20
36
1.69
26066--26097
6
5.3
6
92
0
55
53
31
0
15
1.43
26134--26274
38
3.7
38
85
2
185
23
32
17
26
1.96
32020--32083
21
3.0
21
76
2
74
20
45
21
12
1.84
36186--36341
79
2.0
79
98
0
303
28
24
12
35
1.91
38298--38330
2
16.5
2
93
0
57
3
0
48
48
1.17
38387--38442
27
2.1
26
83
9
69
39
7
1
51
1.40
44406--44440
18
1.9
18
94
0
61
54
11
17
17
1.71
44503--44578
31
2.6
29
77
8
73
30
23
14
31
1.94
48062--48107
21
2.2
21
84
7
58
26
21
32
19
1.97

Tables:   1

The End!