Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014175.1 Corchorus olitorius cultivar O-4 contig14208, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26948

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2692--2734
22
2.0
22
85
0
59
53
6
13
25
1.65
2832--2896
26
2.4
26
87
5
94
46
26
15
12
1.81
9922--9958
19
1.9
19
100
0
74
37
5
0
56
1.22
9924--9965
19
2.2
19
91
0
66
42
4
0
52
1.22
11465--11558
45
2.2
43
86
7
129
39
20
6
34
1.78
12375--12419
2
22.5
2
91
8
74
48
0
2
48
1.13
12452--12499
18
2.8
17
73
17
53
31
16
2
50
1.57
14075--14107
2
16.5
2
100
0
66
51
0
0
48
1.00
14644--14687
2
22.0
2
84
9
54
47
0
4
47
1.22
14635--14676
18
2.3
18
95
0
75
45
0
9
45
1.36
15220--15348
49
2.7
48
78
8
138
45
6
17
31
1.72

Tables:   1

The End!