Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014179.1 Corchorus olitorius cultivar O-4 contig14212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11477

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
241--288
13
3.6
13
83
5
60
29
0
0
70
0.87
245--293
17
2.7
18
84
6
64
28
2
0
69
1.00
245--293
25
2.1
25
81
11
59
28
2
0
69
1.00
381--440
24
2.5
24
97
2
113
20
0
56
23
1.42
1820--2087
107
2.5
107
86
3
362
42
8
8
40
1.64
4727--4772
12
3.5
12
78
21
56
60
0
4
34
1.16
6459--6607
78
1.9
78
92
0
253
48
2
14
34
1.58
6885--6923
19
2.1
19
100
0
78
53
20
5
20
1.64
8065--8200
68
2.0
68
100
0
272
32
16
16
35
1.91

Tables:   1

The End!