Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014181.1 Corchorus olitorius cultivar O-4 contig14214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74967

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6187--6213
12
2.2
12
100
0
54
22
33
11
33
1.89
10713--10908
108
1.8
109
83
5
263
42
8
11
38
1.70
15863--15949
27
3.2
27
78
4
68
34
11
21
32
1.89
20730--20771
16
2.6
16
81
7
50
21
2
14
61
1.43
29937--29971
16
2.1
17
89
5
54
14
20
2
62
1.43
40527--40551
7
3.6
7
100
0
50
12
16
40
32
1.84
44841--44867
11
2.5
11
100
0
54
14
37
40
7
1.74
48855--48880
11
2.4
11
100
0
52
69
7
15
7
1.35
60774--60834
30
2.0
30
87
6
88
29
11
34
24
1.91
65819--65877
30
2.0
30
100
0
118
37
20
6
35
1.79

Tables:   1

The End!