Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014182.1 Corchorus olitorius cultivar O-4 contig14215, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7958

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
749--790
15
2.7
15
92
3
66
11
9
14
64
1.50
1136--1207
24
2.9
24
79
10
83
44
9
12
33
1.75
1138--1207
25
2.8
25
80
2
79
45
10
11
32
1.73
1140--1219
25
3.2
25
76
15
78
40
11
13
35
1.81
3462--3519
24
2.4
24
94
0
98
25
20
25
27
1.99
4490--4549
21
2.8
21
76
2
66
18
45
23
13
1.84
4908--4937
15
2.1
14
93
6
51
13
16
6
63
1.50

Tables:   1

The End!