Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014192.1 Corchorus olitorius cultivar O-4 contig14225, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8328

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49--291
22
11.0
23
74
10
98
31
10
18
39
1.85
149--292
66
2.2
65
79
6
157
31
12
16
38
1.86
49--268
44
5.0
44
71
10
173
30
10
18
39
1.85
3335--3404
25
2.8
25
95
0
122
24
17
27
31
1.97
4581--4661
39
2.0
40
90
2
128
50
7
3
38
1.48
5063--5115
3
17.7
3
100
0
106
66
0
0
33
0.92
5707--5776
36
1.9
36
91
0
113
60
8
10
21
1.55

Tables:   1

The End!