Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014193.1 Corchorus olitorius cultivar O-4 contig14226, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44652

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5467--5602
54
2.5
55
80
6
150
19
19
20
41
1.91
9302--9364
21
3.0
21
77
9
56
53
7
6
31
1.55
16199--16245
23
2.0
23
95
0
85
61
14
10
12
1.56
28024--28055
15
2.1
15
94
0
55
40
18
25
15
1.90
31023--31139
58
2.0
58
98
0
225
23
37
11
26
1.90
37108--37158
19
2.7
19
77
14
61
47
0
1
50
1.12

Tables:   1

The End!