Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001420.1 Corchorus olitorius cultivar O-4 contig01420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1693

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37--157
22
5.6
21
74
13
86
39
12
12
35
1.81
37--140
43
2.4
45
76
9
117
39
13
11
35
1.81
101--157
22
2.6
22
97
0
105
43
8
12
35
1.73
13--178
65
2.6
64
76
7
165
38
11
14
35
1.82
65--243
22
8.1
22
74
11
98
37
9
18
33
1.84
358--520
22
7.5
22
76
9
154
38
12
13
36
1.82
327--519
87
2.2
87
98
0
370
36
13
12
36
1.83
358--521
44
3.8
44
76
8
181
37
12
14
35
1.83
502--557
21
2.8
19
75
17
60
32
10
14
42
1.80

Tables:   1

The End!