Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014212.1 Corchorus olitorius cultivar O-4 contig14245, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12739

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4626--4724
45
2.2
46
98
1
191
36
8
7
48
1.60
5790--5826
3
12.3
3
88
0
56
37
0
0
62
0.96
7970--8006
19
1.9
19
88
0
56
40
13
16
29
1.86
8318--8394
26
3.0
26
96
1
138
18
23
3
54
1.60
10837--10914
32
2.5
31
87
2
102
21
5
33
39
1.76
10854--10925
32
2.2
32
85
0
90
23
5
31
38
1.78
11145--11221
32
2.4
32
78
4
93
9
10
28
51
1.66
11130--11221
16
5.8
16
69
5
60
9
10
27
52
1.68

Tables:   1

The End!