Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014215.1 Corchorus olitorius cultivar O-4 contig14248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26215

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4952--6179
454
2.7
452
91
2
1939
43
17
12
26
1.85
6788--6833
2
22.5
2
91
4
74
50
4
0
45
1.21
8784--8820
19
2.0
19
94
5
67
37
0
0
62
0.96
8790--8831
19
2.2
19
86
0
57
42
2
0
54
1.13
10208--10270
21
2.9
23
77
13
62
46
9
12
31
1.74
10236--10379
22
6.5
22
73
10
107
38
9
12
39
1.76
10261--10336
21
3.5
20
77
13
80
40
11
7
39
1.71
12204--12264
31
2.0
31
90
6
97
52
4
16
26
1.64
12902--12929
7
4.0
7
100
0
56
14
14
57
14
1.66
14006--14268
31
8.5
31
93
0
346
33
22
24
19
1.97
14435--14496
31
2.1
29
82
8
72
29
9
24
37
1.87
14445--14503
31
1.9
31
96
0
109
22
13
28
35
1.92
16854--16890
16
2.3
16
95
0
65
37
29
13
18
1.90

Tables:   1

The End!