Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014222.1 Corchorus olitorius cultivar O-4 contig14255, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103303

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
870--912
15
2.7
15
85
7
50
9
13
0
76
1.01
924--1163
105
2.3
102
86
6
331
42
8
7
41
1.63
20933--20999
34
2.0
34
93
0
116
55
7
0
37
1.28
26408--26436
12
2.3
13
94
5
51
0
10
0
89
0.48
29349--29543
64
3.0
64
96
0
363
19
24
26
29
1.98
30290--30375
40
2.1
41
93
2
147
40
11
20
26
1.87
38410--38585
89
2.0
86
95
3
316
24
17
17
41
1.89
49716--49760
22
2.0
23
83
12
58
22
24
8
44
1.81
54313--54372
28
2.1
30
90
6
97
41
15
26
16
1.88
59549--59581
10
3.2
10
95
4
57
87
9
0
3
0.63
66493--66531
19
2.1
19
95
0
69
5
28
5
61
1.39
78729--78766
15
2.5
15
87
8
51
5
23
0
71
1.07
89595--89797
111
1.9
106
88
5
307
31
18
27
22
1.97

Tables:   1

The End!