Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014224.1 Corchorus olitorius cultivar O-4 contig14257, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8517

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24--1979
333
5.9
330
88
3
2770
35
14
16
33
1.89
2409--5584
330
9.5
329
72
13
1742
33
16
16
33
1.91
4063--5584
330
4.6
328
86
5
2036
35
14
16
33
1.89
5309--5866
284
2.0
279
84
6
743
32
16
15
35
1.90
6006--7086
332
3.3
327
80
7
1125
34
15
15
34
1.90
7313--8514
333
3.6
331
80
9
1120
32
13
17
36
1.89

Tables:   1

The End!