Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014228.1 Corchorus olitorius cultivar O-4 contig14261, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4687

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--117
31
3.1
30
89
4
138
33
14
9
42
1.78
22--117
30
3.1
31
88
7
142
33
14
9
42
1.78
241--314
29
2.5
30
84
8
89
44
10
18
25
1.82
334--3207
336
8.5
331
84
5
3476
32
13
17
35
1.90
334--3207
333
8.5
331
84
5
3450
32
13
17
35
1.90
334--3207
682
4.3
664
86
4
3645
32
13
17
35
1.90
2918--3494
286
2.0
285
92
1
960
32
14
17
35
1.90
3203--4685
334
4.4
334
80
7
1531
31
14
18
35
1.91

Tables:   1

The End!