Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014240.1 Corchorus olitorius cultivar O-4 contig14273, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17288

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1759--1833
31
2.4
31
86
6
98
32
9
29
29
1.88
1920--1971
25
2.1
25
85
7
70
9
28
5
55
1.55
2134--2193
27
2.2
28
93
3
104
48
5
20
26
1.70
3095--3170
40
1.9
40
97
0
143
23
19
13
43
1.86
3658--3687
4
7.5
4
92
0
51
23
3
0
73
0.98
5744--5812
29
2.4
29
100
0
138
24
39
27
8
1.85
6074--6133
29
2.1
29
96
0
111
25
25
15
35
1.94
6408--6482
16
4.4
17
73
23
59
57
1
1
40
1.16
6408--6483
9
7.8
9
73
16
62
56
1
1
40
1.16
12535--12641
55
1.9
55
86
0
151
25
16
17
40
1.91
13847--13874
14
2.0
14
100
0
56
35
14
7
42
1.73
16801--16841
2
20.5
2
100
0
82
51
0
0
48
1.00

Tables:   1

The End!