Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014247.1 Corchorus olitorius cultivar O-4 contig14280, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48172

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4649--4679
2
16.0
2
93
6
55
51
0
0
48
1.00
8184--8261
39
2.0
39
87
5
113
17
51
12
17
1.76
18418--18472
27
2.0
27
86
6
76
49
12
5
32
1.64
23306--23343
16
2.4
16
86
4
51
7
0
7
84
0.79
27176--27339
31
5.4
30
68
16
124
35
19
18
26
1.95
27180--27339
60
2.7
60
95
0
275
36
19
18
26
1.94
27385--27549
31
5.5
30
71
13
142
29
18
17
34
1.94
27384--27545
60
2.7
59
90
1
243
29
17
17
35
1.93
29458--29556
48
2.1
48
96
0
180
41
4
24
30
1.73
33752--33787
17
2.1
17
94
0
63
41
5
36
16
1.72
46576--47238
320
2.1
320
85
3
877
35
17
15
31
1.91

Tables:   1

The End!