Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014249.1 Corchorus olitorius cultivar O-4 contig14282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54812

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--233
111
2.0
111
99
0
441
28
12
46
12
1.79
458--540
36
2.3
36
81
6
96
22
6
50
20
1.70
1168--1264
50
2.0
49
93
2
167
23
14
11
50
1.75
2961--3012
2
25.5
2
96
3
95
50
0
1
48
1.12
13621--13652
3
10.7
3
93
0
55
0
28
0
71
0.86
20377--20403
6
4.5
6
100
0
54
70
14
0
14
1.17
47467--47505
13
3.0
13
85
7
53
51
23
10
15
1.73
47456--47501
13
3.3
13
82
11
56
43
28
10
17
1.82
47808--47835
2
14.0
2
100
0
56
50
0
0
50
1.00
48284--48340
29
2.0
29
89
6
89
57
0
1
40
1.09
54237--54812
228
2.5
228
89
1
850
28
25
24
21
1.99

Tables:   1

The End!