Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014253.1 Corchorus olitorius cultivar O-4 contig14286, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28916

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--1721
334
5.2
332
86
5
2161
33
14
16
35
1.89
1--1719
665
2.6
649
85
5
2229
33
14
16
35
1.89
5522--6053
283
1.9
283
94
0
931
33
18
16
31
1.94
6882--7099
84
2.6
83
94
2
377
32
22
11
33
1.90
8963--8997
13
2.6
14
90
4
54
17
11
25
45
1.81
9746--9826
42
2.0
41
87
7
119
41
14
9
33
1.79
17975--18203
116
2.0
116
99
0
449
32
17
21
27
1.96
21316--21384
34
2.0
35
91
2
113
23
37
1
37
1.64
25969--26008
20
2.0
20
100
0
80
20
20
25
35
1.96

Tables:   1

The End!