Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014256.1 Corchorus olitorius cultivar O-4 contig14289, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18347

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2064--2247
93
2.0
94
90
1
289
31
25
11
31
1.92
2016--2459
210
2.1
211
91
2
723
32
22
12
31
1.92
2157--2367
117
1.8
116
89
1
332
33
22
12
31
1.92
2296--2365
26
2.7
25
80
6
77
40
22
7
30
1.81
2268--2459
93
2.1
94
87
3
271
30
22
11
35
1.90
2388--2452
27
2.4
27
82
2
69
36
21
12
29
1.90
2597--2697
41
2.5
41
86
0
139
25
21
15
36
1.93
5634--5674
12
3.3
12
90
10
57
58
4
7
29
1.46

Tables:   1

The End!