Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014259.1 Corchorus olitorius cultivar O-4 contig14292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73470

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1183--1299
58
2.0
58
96
0
216
23
23
21
31
1.98
2239--2436
65
3.0
65
98
0
378
33
12
20
33
1.90
28851--28877
14
1.9
14
100
0
54
37
40
0
22
1.54
33362--33404
21
2.1
21
86
4
61
2
20
4
72
1.14
50082--50109
14
2.0
14
100
0
56
50
14
14
21
1.78
65156--65353
83
2.3
86
82
4
224
32
14
21
31
1.94
71440--71840
209
1.9
209
100
0
802
29
20
20
29
1.98
72227--72262
1
36.0
1
100
0
72
0
0
0
100
0.00

Tables:   1

The End!