Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014260.1 Corchorus olitorius cultivar O-4 contig14293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35171

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8282--8307
13
2.0
13
100
0
52
53
0
0
46
1.00
15169--15273
54
1.9
54
86
7
151
40
19
7
33
1.80
18235--18358
48
2.6
48
83
2
142
29
17
27
25
1.98
20936--20984
15
3.3
15
76
0
53
26
28
4
40
1.74
21041--21094
15
3.6
15
75
9
56
9
42
1
46
1.46
21024--21088
27
2.5
26
89
2
94
6
44
1
47
1.37
30383--35168
322
14.7
319
78
9
4022
33
14
16
34
1.89
33199--33280
40
2.0
40
92
0
137
32
15
12
39
1.85
32231--35171
988
3.0
990
90
5
4580
33
14
17
34
1.90

Tables:   1

The End!