Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014279.1 Corchorus olitorius cultivar O-4 contig14312, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4182

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
113--147
18
1.9
18
88
11
54
51
5
11
31
1.61
356--447
36
2.6
35
91
1
139
56
14
8
20
1.64
431--478
25
1.9
25
95
0
87
43
12
14
29
1.82
2002--2114
51
2.2
52
88
4
167
29
15
7
47
1.72
2104--2159
24
2.6
20
77
20
67
48
5
16
30
1.68
2119--2171
24
2.2
24
90
6
81
50
5
18
24
1.68
2489--2582
45
2.2
43
88
7
138
38
23
5
32
1.77
3509--3539
6
5.2
6
92
0
53
19
35
0
45
1.51

Tables:   1

The End!