Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014283.1 Corchorus olitorius cultivar O-4 contig14316, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26759

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
595--667
30
2.4
30
84
4
94
16
10
34
38
1.84
847--889
21
2.0
21
91
8
70
44
11
16
27
1.82
4095--4149
21
2.6
21
88
0
74
16
49
21
12
1.79
14647--14788
50
2.9
48
83
11
166
28
14
5
51
1.65
15574--15610
15
2.5
15
90
0
56
40
13
27
18
1.88
26732--26759
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!