Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014284.1 Corchorus olitorius cultivar O-4 contig14317, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19542

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2058--2197
49
2.9
47
82
10
160
27
15
5
50
1.67
7202--7245
20
2.3
18
81
11
52
25
2
4
68
1.20
7315--7343
10
3.0
10
95
5
51
27
0
0
72
0.85
10163--10332
89
1.9
91
91
2
281
42
12
8
36
1.72
10385--10417
14
2.3
15
89
5
50
51
3
0
45
1.16
15921--15978
26
2.2
26
88
11
84
67
10
10
12
1.43
16247--16282
19
1.9
18
88
5
54
77
5
2
13
1.05

Tables:   1

The End!