Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014286.1 Corchorus olitorius cultivar O-4 contig14319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22499

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3713--3738
11
2.4
11
100
0
52
69
7
15
7
1.35
5833--5862
15
2.1
15
93
6
53
63
6
16
13
1.50
6220--6278
21
2.8
21
76
2
64
15
23
44
16
1.86
8716--8792
30
2.6
30
86
8
106
40
14
3
41
1.64
8715--8824
29
3.8
28
79
12
98
40
16
4
38
1.69
9153--9194
15
2.7
15
92
3
66
64
14
9
11
1.50
9956--9981
11
2.4
11
100
0
52
69
7
15
7
1.35
19481--19523
22
1.9
23
95
4
79
25
23
13
37
1.92

Tables:   1

The End!