Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014290.1 Corchorus olitorius cultivar O-4 contig14323, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88812

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12280--12313
12
2.8
12
95
4
59
88
0
11
0
0.52
21381--21436
26
2.2
25
81
12
60
60
14
3
21
1.49
38774--38874
51
2.0
49
90
3
157
34
21
8
34
1.85
39134--39179
23
2.0
23
95
0
83
32
0
17
50
1.47
39660--39730
37
2.0
37
83
8
94
50
16
1
30
1.54
39741--39795
28
2.0
28
100
0
110
27
7
25
40
1.82
51205--51275
29
2.4
29
84
9
83
23
15
12
47
1.80
51310--51393
33
2.5
33
90
0
132
21
20
33
25
1.97
52811--52837
2
13.5
2
100
0
54
48
0
0
51
1.00
52841--52875
2
17.5
2
100
0
70
0
0
48
51
1.00
58437--58472
17
2.2
16
90
5
54
8
13
0
77
0.98
74782--74838
27
2.1
28
90
3
89
19
28
28
24
1.98
76092--76202
56
2.0
56
100
0
222
27
27
17
28
1.97
77870--77927
31
1.9
30
82
10
73
12
20
36
31
1.89
78627--78658
16
2.0
16
100
0
64
25
6
37
31
1.81
80088--80152
31
2.1
31
94
0
112
41
15
9
33
1.79
81301--81327
14
1.9
14
100
0
54
37
18
22
22
1.95
81700--81726
14
1.9
14
100
0
54
37
18
22
22
1.95
82030--82148
46
2.6
46
91
1
193
42
15
6
34
1.74

Tables:   1

The End!